Use of Metabolomics as a Complementary Omic Approach to Implement Risk Criteria for First-Degree Relatives of Gastric Cancer Patients
Giuseppe Corona, Renato Cannizzaro, Gianmaria Miolo, Laura Caggiari, Mariangela De Zorzi, Ombretta Repetto et al. · 2018 · 43 citationsRead the paper
A positive family history is a strong and consistently reported risk factor for gastric cancer (GC). So far, it has been demonstrated that serum pepsinogens (PGs), and gastrin 17 (G17) are useful for screening individuals at elevated risk to develop atrophic gastritis but they are suboptimal biomarkers to screen individuals for GC. The main purpose of this study was to investigate serum metabolomic profiles to find additional biomarkers that could be integrated with serum PGs and G17 to improve the diagnosis of GC and the selection of first-degree relatives (FDR) at higher risk of GC development. Serum metabolomic profiles included 188 serum metabolites, covering amino acids, biogenic amines, acylcarnitines, phosphatidylcholines, sphingomyelins and hexoses. Serum metabolomic profiles were performed with tandem mass spectrometry using the Biocrates AbsoluteIDQ p180 kit. The initial cohort (training set) consisted of n = 49 GC patients and n = 37 FDR. Differential metabolomic signatures among the two groups were investigated by univariate and multivariate partial least square differential analysis. The most significant metabolites were further selected and validated in an independent group of n = 22 GC patients and n = 17 FDR (validation set). Receiver operating characteristic (ROC) curves were used to evaluate the diagnostic power and the optimal cut-off for each of the discriminant markers. Multivariate analysis was applied to associate the selected serum metabolites, PGs, G17 and risk factors such as age, gender and Helicobacter pylori (H. pylori) infection with the GC and FDR has been performed and an integrative risk prediction algorithm was developed. In the training set, 40 metabolites mainly belonging to phospholipids and acylcarnitines classes were differentially expressed between GC and FDR. Out of these 40 metabolites, 9 were further confirmed in the validation set. Compared with FDR, GC patients were characterized by lower levels of hydroxylated sphingomyelins (SM(OH)22:1, SM(OH)22:2, SM(OH)24:1) and phosphatidylcholines (PC ae 40:1, PC ae 42:2, PC ae 42:3) and by higher levels of acylcarnitines derivatives (C2, C16, C18:1). The specificity and sensitivity of the integrative risk prediction analysis of metabolites for GC was 73.47% and 83.78% respectively with an area under the curve of the ROC curve of 0.811 that improves to 0.90 when metabolites were integrated with the serum PGs. The predictive risk algorithm composed of the C16, SM(OH)22:1 and PG-II serum levels according to the age of individuals, could be used to stratify FDR at high risk of GC development, and then this can be addressed with diagnostic gastroscopy.
What the full text shows
Working prototype- An integrated risk model combining metabolites (SM(OH)22:1, C16), age, and PG-II outperformed the standard PG-I/PG-II ratio for GC detection. — AUC 0.857 vs. 0.765 (First-degree relatives (FDR) and GC patients)
- The integrated model correctly identified a significantly higher proportion of GC patients compared to the PG-I/PG-II ratio test. — 73% vs. 12.7% (Using optimal cut-off Y > 0.063 vs. PG-I/PG-II ratio ≤ 3)
- Specific phospholipids (PC ae 40:1, PC ae 42:2, PC ae 42:3, SM(OH)22:1, SM(OH)22:2) were found to be decreased specifically in GC patients compared to FDR and other cancer types. — p < 0.05 (Compared against non-Hodgkin lymphoma and breast cancer groups)
- High C16 and low SM(OH)22:1 metabolites were identified as independent risk factors for GC. — Odds ratios: C16 = 2.83 (1.66–4.82), SM(OH)22:1 = 1.39 (1.19–1.62) (Training set logistic regression model)
- A PLS-DA model discriminated GC patients from FDR with moderate accuracy. — 72% classification accuracy (Training set)
- Setup
- 71 GC patients and 54 first-degree relatives (FDR), split into a training set (49 GC, 37 FDR) and a validation set (22 GC, 17 FDR).
- How
- Targeted serum metabolomics using LC-MS/MS (Biocrates AbsoluteIDQ p180 kit) to quantify 188 metabolites. Data were analyzed via PLS-DA and univariate t-tests, followed by the development of a multifactor logistic regression model integrating metabolites, age, and pepsinogen levels.
- Limitations
- Small sample size · Short follow-up period for FDRs · Potential bias due to retrospective study design
Summarized by Gemma 4 from the open-access full text · 16 Oct 2026. Read it